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Open-Source Sequence Clustering Methods Improve the State Of the Art. [electronic resource] by
- Kopylova, Evguenia
- Navas-Molina, Jose A
- Mercier, Céline
- Xu, Zhenjiang Zech
- Mahé, Frédéric
- He, Yan
- Zhou, Hong-Wei
- Rognes, Torbjørn
- Caporaso, J Gregory
- Knight, Rob
Publication details: mSystems
In:
mSystems vol. 1
Availability: No items available.
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12.
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Calour: an Interactive, Microbe-Centric Analysis Tool. [electronic resource] by
- Xu, Zhenjiang Zech
- Amir, Amnon
- Sanders, Jon
- Zhu, Qiyun
- Morton, James T
- Bletz, Molly C
- Tripathi, Anupriya
- Huang, Shi
- McDonald, Daniel
- Jiang, Lingjing
- Knight, Rob
Publication details: mSystems
In:
mSystems vol. 4
Availability: No items available.
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13.
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Normalization and microbial differential abundance strategies depend upon data characteristics. [electronic resource] by
- Weiss, Sophie
- Xu, Zhenjiang Zech
- Peddada, Shyamal
- Amir, Amnon
- Bittinger, Kyle
- Gonzalez, Antonio
- Lozupone, Catherine
- Zaneveld, Jesse R
- Vázquez-Baeza, Yoshiki
- Birmingham, Amanda
- Hyde, Embriette R
- Knight, Rob
Producer: 20170626
In:
Microbiome vol. 5
Availability: No items available.
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14.
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Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information. [electronic resource] by
- Janssen, Stefan
- McDonald, Daniel
- Gonzalez, Antonio
- Navas-Molina, Jose A
- Jiang, Lingjing
- Xu, Zhenjiang Zech
- Winker, Kevin
- Kado, Deborah M
- Orwoll, Eric
- Manary, Mark
- Mirarab, Siavash
- Knight, Rob
Publication details: mSystems
In:
mSystems vol. 3
Availability: No items available.
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15.
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Exposure to toxic metals triggers unique responses from the rat gut microbiota. [electronic resource] by
- Richardson, Joshua B
- Dancy, Blair C R
- Horton, Cassandra L
- Lee, Young S
- Madejczyk, Michael S
- Xu, Zhenjiang Zech
- Ackermann, Gail
- Humphrey, Gregory
- Palacios, Gustavo
- Knight, Rob
- Lewis, John A
Producer: 20191016
In:
Scientific reports vol. 8
Availability: No items available.
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16.
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Intermittent Hypoxia and Hypercapnia Reproducibly Change the Gut Microbiome and Metabolome across Rodent Model Systems. [electronic resource] by
- Tripathi, Anupriya
- Xu, Zhenjiang Zech
- Xue, Jin
- Poulsen, Orit
- Gonzalez, Antonio
- Humphrey, Gregory
- Meehan, Michael J
- Melnik, Alexey V
- Ackermann, Gail
- Zhou, Dan
- Malhotra, Atul
- Haddad, Gabriel G
- Dorrestein, Pieter C
- Knight, Rob
Publication details: mSystems
In:
mSystems vol. 4
Availability: No items available.
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17.
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Gut Microbiota Offers Universal Biomarkers across Ethnicity in Inflammatory Bowel Disease Diagnosis and Infliximab Response Prediction. [electronic resource] by
- Zhou, Youlian
- Xu, Zhenjiang Zech
- He, Yan
- Yang, Yunsheng
- Liu, Le
- Lin, Qianyun
- Nie, Yuqiang
- Li, Mingsong
- Zhi, Fachao
- Liu, Side
- Amir, Amnon
- González, Antonio
- Tripathi, Anupriya
- Chen, Minhu
- Wu, Gary D
- Knight, Rob
- Zhou, Hongwei
- Chen, Ye
Publication details: mSystems
In:
mSystems vol. 3
Availability: No items available.
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18.
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Human Skin, Oral, and Gut Microbiomes Predict Chronological Age. [electronic resource] by
- Huang, Shi
- Haiminen, Niina
- Carrieri, Anna-Paola
- Hu, Rebecca
- Jiang, Lingjing
- Parida, Laxmi
- Russell, Baylee
- Allaband, Celeste
- Zarrinpar, Amir
- Vázquez-Baeza, Yoshiki
- Belda-Ferre, Pedro
- Zhou, Hongwei
- Kim, Ho-Cheol
- Swafford, Austin D
- Knight, Rob
- Xu, Zhenjiang Zech
Publication details: mSystems Feb 2020
In:
mSystems vol. 5
Availability: No items available.
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19.
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Taxon-specific aerosolization of bacteria and viruses in an experimental ocean-atmosphere mesocosm. [electronic resource] by
- Michaud, Jennifer M
- Thompson, Luke R
- Kaul, Drishti
- Espinoza, Josh L
- Richter, R Alexander
- Xu, Zhenjiang Zech
- Lee, Christopher
- Pham, Kevin M
- Beall, Charlotte M
- Malfatti, Francesca
- Azam, Farooq
- Knight, Rob
- Burkart, Michael D
- Dupont, Christopher L
- Prather, Kimberly A
Producer: 20181211
In:
Nature communications vol. 9
Availability: No items available.
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20.
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Correlation detection strategies in microbial data sets vary widely in sensitivity and precision. [electronic resource] by
- Weiss, Sophie
- Van Treuren, Will
- Lozupone, Catherine
- Faust, Karoline
- Friedman, Jonathan
- Deng, Ye
- Xia, Li Charlie
- Xu, Zhenjiang Zech
- Ursell, Luke
- Alm, Eric J
- Birmingham, Amanda
- Cram, Jacob A
- Fuhrman, Jed A
- Raes, Jeroen
- Sun, Fengzhu
- Zhou, Jizhong
- Knight, Rob
Producer: 20170926
In:
The ISME journal vol. 10
Availability: No items available.
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