Simultaneously learning DNA motif along with its position and sequence rank preferences through expectation maximization algorithm.

Zhang, ZhiZhuo

Simultaneously learning DNA motif along with its position and sequence rank preferences through expectation maximization algorithm. [electronic resource] - Journal of computational biology : a journal of computational molecular cell biology Mar 2013 - 237-48 p. digital

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

1557-8666

10.1089/cmb.2012.0233 doi


Algorithms
Base Sequence
Chromatin Immunoprecipitation
Computational Biology--methods
Databases, Nucleic Acid
Nucleotide Motifs--genetics
Position-Specific Scoring Matrices
Transcription Factors--metabolism